Transcript: ENST00000407977.2 RNF43-003

Description

ring finger protein 43 [Source:HGNC Symbol;Acc:18505]

Gene Synonyms

DKFZp781H0392, FLJ20315, RNF124, URCC

Location

Chromosome 17: 56,429,861-56,494,713 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 18 domains and features, is associated with 30733 variant alleles and maps to 584 oligo probes.

Gene

This transcript is a product of gene ENSG00000108375.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000584437.1	RNF43-002	5575	783aa	ENSP00000463069.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11607	Q68DV7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000407977.2	RNF43-003	5516	783aa	ENSP00000385328.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11607	Q68DV7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000500597.2	RNF43-201	5160	742aa	ENSP00000441969.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q68DV7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000577716.1	RNF43-001	4367	783aa	ENSP00000462764.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11607	Q68DV7	NM_017763.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000583753.1	RNF43-005	3560	742aa	ENSP00000462502.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q68DV7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000581868.1	RNF43-004	2610	742aa	ENSP00000462447.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KSE3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000577625.1	RNF43-006	2198	656aa	ENSP00000463716.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q68DV7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000580014.1	RNF43-007	497	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000582293.1	RNF43-008	324	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 5,516 bps, Translation length: 783 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q68DV7

CCDS

This transcript is a member of the Human CCDS set: CCDS11607

Version

ENST00000407977.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000444711 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000407977.2 RNF43-003

Summary