Transcript: ENST00000584437.1 RNF43-002

Description

ring finger protein 43 [Source:HGNC Symbol;Acc:18505]

Gene Synonyms

DKFZp781H0392, FLJ20315, RNF124, URCC

Location

Chromosome 17: 56,431,037-56,494,894 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 18 domains and features, is associated with 30339 variant alleles and maps to 499 oligo probes.

Gene

This transcript is a product of gene ENSG00000108375.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000584437.1	RNF43-002	5575	783aa	ENSP00000463069.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11607	Q68DV7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000407977.2	RNF43-003	5516	783aa	ENSP00000385328.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11607	Q68DV7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000500597.2	RNF43-201	5160	742aa	ENSP00000441969.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q68DV7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000577716.1	RNF43-001	4367	783aa	ENSP00000462764.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11607	Q68DV7	NM_017763.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000583753.1	RNF43-005	3560	742aa	ENSP00000462502.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q68DV7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000581868.1	RNF43-004	2610	742aa	ENSP00000462447.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KSE3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000577625.1	RNF43-006	2198	656aa	ENSP00000463716.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q68DV7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000580014.1	RNF43-007	497	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000582293.1	RNF43-008	324	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 5,575 bps, Translation length: 783 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q68DV7

CCDS

This transcript is a member of the Human CCDS set: CCDS11607

Version

ENST00000584437.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000444713 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000584437.1 RNF43-002

Summary