Transcript: ENST00000533319.1 TLX1-004

Description

T-cell leukemia homeobox 1 [Source:HGNC Symbol;Acc:5056]

Gene Synonyms

HOX11, TCL3

Location

About this transcript

This transcript has 2 exons, is associated with 646 variant alleles and maps to 62 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000370196.6	TLX1-001	3910	330aa	ENSP00000359215.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7510	P31314	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467928.2	TLX1-003	1838	257aa	ENSP00000434914.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55725	P31314	NM_005521.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000463716.2	TLX1-002	1440	218aa	ENSP00000434358.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V1B7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000533319.1	TLX1-004	334	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000525019.1	TLX1-005	226	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 334 bps,

Version

ENST00000533319.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000394896 (version 1)