Transcript: ENST00000407693.2 PTGR1-202

Description

prostaglandin reductase 1 [Source:HGNC Symbol;Acc:18429]

Gene Synonyms

LTB4DH, PGR1, ZADH3

Location

Chromosome 9: 114,325,247-114,362,135 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 12 domains and features, is associated with 15364 variant alleles and maps to 431 oligo probes.

Gene

This transcript is a product of gene ENSG00000106853.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000407693.2	PTGR1-202	1407	329aa	ENSP00000385763.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6779	Q14914	NM_001146108.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000309195.5	PTGR1-001	1223	329aa	ENSP00000311572.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6779	Q14914	NM_012212.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538962.1	PTGR1-203	1220	301aa	ENSP00000440281.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55331	Q14914	NM_001146109.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000238248.3	PTGR1-201	1166	177aa	ENSP00000238248.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F2Z3J9 Q5JVP3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422125.1	PTGR1-002	461	119aa	ENSP00000395965.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JVP2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000374324.1	PTGR1-004	2298	73aa	ENSP00000363444.1	Nonsense mediated decay		F6XGT7	-	-
ENST00000466771.1	PTGR1-006	1094	118aa	ENSP00000435665.1	Nonsense mediated decay		F2Z3J9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000374313.1	PTGR1-003	1061	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000374308.1	PTGR1-005	847	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485319.1	PTGR1-007	389	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 1,407 bps, Translation length: 329 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q14914

CCDS

This transcript is a member of the Human CCDS set: CCDS6779

Version

ENST00000407693.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript having same CDS:	OTTHUMT00000053647 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000407693.2 PTGR1-202

Summary