Transcript: ENST00000422398.1 SLC1A1-002

Description

solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 [Source:HGNC Symbol;Acc:10939]

Gene Synonyms

EAAC1, EAAT3, SCZD18

Location

About this transcript

This transcript has 5 exons, is annotated with 12 domains and features, is associated with 6824 variant alleles and maps to 223 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262352.3	SLC1A1-001	3722	524aa	ENSP00000262352.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6452	P43005	NM_004170.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422398.1	SLC1A1-002	726	242aa	ENSP00000414620.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000490167.1	SLC1A1-003	484	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 726 bps, Translation length: 242 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENST00000422398.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000051572 (version 1)