Transcript: ENST00000262352.3 SLC1A1-001

Description

solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 [Source:HGNC Symbol;Acc:10939]

Gene Synonyms

EAAC1, EAAT3, SCZD18

Location

About this transcript

This transcript has 12 exons, is annotated with 29 domains and features, is associated with 51936 variant alleles and maps to 590 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262352.3	SLC1A1-001	3722	524aa	ENSP00000262352.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6452	P43005	NM_004170.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422398.1	SLC1A1-002	726	242aa	ENSP00000414620.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000490167.1	SLC1A1-003	484	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 3,722 bps, Translation length: 524 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P43005

CCDS

This transcript is a member of the Human CCDS set: CCDS6452

Version

ENST00000262352.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000051571 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.