Transcript: ENST00000262570.5 CHCHD3-001

Description

coiled-coil-helix-coiled-coil-helix domain containing 3 [Source:HGNC Symbol;Acc:21906]

Gene Synonyms

FLJ20420, MINOS3, PPP1R22

Location

Chromosome 7: 132,469,629-132,766,842 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 7 domains and features, is associated with 117000 variant alleles and maps to 310 oligo probes.

Gene

This transcript is a product of gene ENSG00000106554.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262570.5	CHCHD3-001	1598	227aa	ENSP00000262570.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5828	A4D1N4 Q9NX63	NM_017812.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000448878.1	CHCHD3-003	1570	232aa	ENSP00000389297.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JRZ6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542753.1	CHCHD3-201	898	138aa	ENSP00000440267.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V1K1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423635.1	CHCHD3-004	1310	241aa	ENSP00000410425.1	Nonsense mediated decay		F8WAR4	-	-
ENST00000457942.1	CHCHD3-006	559	63aa	ENSP00000403467.1	Nonsense mediated decay		F8WD73	-	-
ENST00000476546.1	CHCHD3-002	1462	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481152.1	CHCHD3-008	890	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496427.1	CHCHD3-007	721	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466644.1	CHCHD3-005	1442	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,598 bps, Translation length: 227 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NX63

CCDS

This transcript is a member of the Human CCDS set: CCDS5828

Version

ENST00000262570.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000338899 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000262570.5 CHCHD3-001

Summary