Transcript: ENST00000555673.1 PTCD1-201

Description

pentatricopeptide repeat domain 1 [Source:HGNC Symbol;Acc:22198]

Gene Synonyms

KIAA0632

Location

Chromosome 7: 99,017,372-99,063,787 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 15 domains and features, is associated with 23518 variant alleles and maps to 362 oligo probes.

Gene

This transcript is a product of gene ENSG00000106246.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000292478.4	PTCD1-001	5582	700aa	ENSP00000292478.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34691	A4D273 C9JBD7 C9JGL8 C9JQN9 C9JWL7 O75127	NM_015545.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555673.1	PTCD1-201	2491	749aa	ENSP00000450995.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56496	A4D273 C9JBD7 C9JGL8 C9JQN9 C9JWL7 G3V325	NM_001198879.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000430982.1	PTCD1-007	571	164aa	ENSP00000390530.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JBD7 C9JGL8 C9JQN9 C9JWL7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000430029.1	PTCD1-004	556	144aa	ENSP00000408059.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JBD7 C9JQN9 C9JWL7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000419981.1	PTCD1-002	533	106aa	ENSP00000401600.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JBD7 C9JWL7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000485746.1	PTCD1-005	721	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,491 bps, Translation length: 749 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS56496

Version

ENST00000555673.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000555673.1 PTCD1-201

Summary