Transcript: ENST00000452990.2 CAPS-002

Description

calcyphosine [Source:HGNC Symbol;Acc:1487]

Gene Synonyms

CAPS1, MGC126562

Location

Chromosome 19: 5,914,251-5,915,886 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 16 domains and features, is associated with 1138 variant alleles and maps to 403 oligo probes.

Gene

This transcript is a product of gene ENSG00000105519.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000588776.1	CAPS-003	3515	275aa	ENSP00000465883.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EL21 K7ES72 Q8NF12 Q96ET4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000222125.5	CAPS-001	1221	189aa	ENSP00000222125.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12156	K7ES72 Q13938 Q96ET4	NM_004058.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000452990.2	CAPS-002	1134	162aa	ENSP00000403263.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45934	K7ES72	NM_080590.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000588865.1	CAPS-004	489	118aa	ENSP00000468582.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ES72	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000585541.1	CAPS-005	784	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000590428.1	CAPS-006	510	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,134 bps, Translation length: 162 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS45934

Version

ENST00000452990.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000452222 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000452990.2 CAPS-002

Summary