Transcript: ENST00000340726.3 EYA1-001

Description

eyes absent homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:3519]

Gene Synonyms

BOP, BOR, BOS1, OFC1

Location

Chromosome 8: 72,109,668-72,274,467 reverse strand.

About this transcript

This transcript has 18 exons, is annotated with 7 domains and features, is associated with 68704 variant alleles and maps to 638 oligo probes.

Gene

This transcript is a product of gene ENSG00000104313.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000340726.3	EYA1-001	4326	592aa	ENSP00000342626.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34906	Q4A4D0 Q99502	NM_001288574.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000303824.7	EYA1-010	3930	586aa	ENSP00000303221.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NCB9 Q4A4D0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000388742.4	EYA1-002	3907	592aa	ENSP00000373394.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34906	Q4A4D0 Q99502	NM_172059.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000388740.3	EYA1-201	3843	559aa	ENSP00000373392.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47873	Q4A4D0 Q99502	NM_172060.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000388741.2	EYA1-012	3404	558aa	ENSP00000373393.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EQM5 Q4A4D0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000388743.2	EYA1-011	2199	591aa	ENSP00000373395.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8WB53 Q4A4D0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419131.1	EYA1-005	1723	557aa	ENSP00000410176.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34907	Q4A4D0 Q99502	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000465115.1	EYA1-003	3743	212aa	ENSP00000428391.1	Nonsense mediated decay		E5RIQ7	-	-
ENST00000493349.1	EYA1-008	879	41aa	ENSP00000428517.1	Nonsense mediated decay		E5RHZ7	-	-
ENST00000496494.1	EYA1-004	2373	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000422295.1	EYA1-007	440	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 18, Coding exons: 16, Transcript length: 4,326 bps, Translation length: 592 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99502

CCDS

This transcript is a member of the Human CCDS set: CCDS34906

Version

ENST00000340726.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000313788 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000340726.3 EYA1-001

Summary