Transcript: ENST00000440970.1 SALL1-201

Description

spalt-like transcription factor 1 [Source:HGNC Symbol;Acc:10524]

Gene Synonyms

HSAL1, Hsal1, SAL1, Sal-1, TBS, ZNF794

Location

Chromosome 16: 51,169,886-51,184,508 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 56 domains and features, is associated with 7955 variant alleles and maps to 439 oligo probes.

Gene

This transcript is a product of gene ENSG00000103449.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000440970.1	SALL1-201	5253	1227aa	ENSP00000407914.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45483	H3BSM9 Q9NSC2	NM_001127892.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000251020.4	SALL1-001	5146	1324aa	ENSP00000251020.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10747	H3BSM9 Q9NSC2	NM_002968.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000570206.1	SALL1-003	3896	1154aa	ENSP00000456777.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BSM9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000566102.1	SALL1-002	565	34aa	ENSP00000455582.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BQ32	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541611.1	SALL1-202	565	147aa	ENSP00000442827.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H733	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000562674.1	SALL1-005	407	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 5,253 bps, Translation length: 1,227 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NSC2

CCDS

This transcript is a member of the Human CCDS set: CCDS45483

Version

ENST00000440970.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000440970.1 SALL1-201

Summary