Transcript: ENST00000263997.6 SLC7A6OS-001

Description

solute carrier family 7, member 6 opposite strand [Source:HGNC Symbol;Acc:25807]

Gene Synonyms

FLJ13291

Location

About this transcript

This transcript has 5 exons, is annotated with 7 domains and features, is associated with 5715 variant alleles and maps to 313 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263997.6	SLC7A6OS-001	4189	309aa	ENSP00000263997.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10865	Q96CW6	NM_032178.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561590.1	SLC7A6OS-003	706	119aa	ENSP00000461470.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L4S1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000568315.1	SLC7A6OS-004	428	39aa	ENSP00000462436.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000561933.1	SLC7A6OS-002	4180	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000568538.1	SLC7A6OS-005	868	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 4,189 bps, Translation length: 309 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96CW6

CCDS

This transcript is a member of the Human CCDS set: CCDS10865

Version

ENST00000263997.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000268894 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.