Transcript: ENST00000609262.1 HNF4A-008

Description

hepatocyte nuclear factor 4, alpha [Source:HGNC Symbol;Acc:5024]

Gene Synonyms

HNF4, HNF4a7, HNF4a8, HNF4a9, HNF4alpha, MODY, MODY1, NR2A1, NR2A21, TCF, TCF14

Location

Chromosome 20: 42,984,445-43,036,114 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 12 domains and features, is associated with 23112 variant alleles and maps to 176 oligo probes.

Gene

This transcript is a product of gene ENSG00000101076.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000316099.4	HNF4A-002	4694	474aa	ENSP00000312987.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13330	F1D8T1 P41235	NM_178849.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415691.2	HNF4A-006	2302	464aa	ENSP00000412111.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46605	F1D8S2 P41235	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000443598.2	HNF4A-004	1603	417aa	ENSP00000410911.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13331	P41235	NM_178850.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000316673.4	HNF4A-001	1470	452aa	ENSP00000315180.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42876	F1D8T0 P41235	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000457232.1	HNF4A-005	1339	442aa	ENSP00000396216.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46604	P41235	NM_175914.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000609795.1	HNF4A-007	1192	395aa	ENSP00000476609.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS68131	-	NM_001030004.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000609262.1	HNF4A-008	540	103aa	ENSP00000476310.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B9VVT8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000372920.1	HNF4A-003	3340	107aa	ENSP00000362011.1	Nonsense mediated decay		F8WBS7	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 540 bps, Translation length: 103 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000609262.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000472005 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000609262.1 HNF4A-008

Summary