Transcript: ENST00000457232.1 HNF4A-005

Description

hepatocyte nuclear factor 4, alpha [Source:HGNC Symbol;Acc:5024]

Gene Synonyms

HNF4, HNF4a7, HNF4a8, HNF4a9, HNF4alpha, MODY, MODY1, NR2A1, NR2A21, TCF, TCF14

Location

Chromosome 20: 42,984,441-43,058,311 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 29 domains and features, is associated with 33106 variant alleles and maps to 345 oligo probes.

Gene

This transcript is a product of gene ENSG00000101076.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000316099.4	HNF4A-002	4694	474aa	ENSP00000312987.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13330	F1D8T1 P41235	NM_178849.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415691.2	HNF4A-006	2302	464aa	ENSP00000412111.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46605	F1D8S2 P41235	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000443598.2	HNF4A-004	1603	417aa	ENSP00000410911.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13331	P41235	NM_178850.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000316673.4	HNF4A-001	1470	452aa	ENSP00000315180.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42876	F1D8T0 P41235	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000457232.1	HNF4A-005	1339	442aa	ENSP00000396216.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46604	P41235	NM_175914.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000609795.1	HNF4A-007	1192	395aa	ENSP00000476609.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS68131	-	NM_001030004.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000609262.1	HNF4A-008	540	103aa	ENSP00000476310.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B9VVT8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000372920.1	HNF4A-003	3340	107aa	ENSP00000362011.1	Nonsense mediated decay		F8WBS7	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,339 bps, Translation length: 442 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P41235

CCDS

This transcript is a member of the Human CCDS set: CCDS46604

Version

ENST00000457232.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000472004 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000457232.1 HNF4A-005

Summary