Transcript: ENST00000557762.1 RIN3-008

Description

Ras and Rab interactor 3 [Source:HGNC Symbol;Acc:18751]

Gene Synonyms

FLJ22439

Location

Chromosome 14: 92,980,148-92,981,851 forward strand.

About this transcript

This transcript has 2 exons, is associated with 872 variant alleles and maps to 59 oligo probes.

Gene

This transcript is a product of gene ENSG00000100599.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000556418.1	RIN3-007	4079	420aa	ENSP00000450986.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000216487.7	RIN3-001	3859	985aa	ENSP00000216487.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32144	Q5CZ74 Q8TB24	NM_024832.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557762.1	RIN3-008	517	78aa	ENSP00000452155.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V534	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555589.1	RIN3-003	2814	159aa	ENSP00000450682.1	Nonsense mediated decay		G3V2I7	-	-
ENST00000418924.2	RIN3-005	3592	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000554888.1	RIN3-011	865	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000553959.1	RIN3-014	687	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000553992.1	RIN3-012	577	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000555908.1	RIN3-013	390	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000556385.1	RIN3-009	856	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000555891.1	RIN3-010	317	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 517 bps, Translation length: 78 residues

Version

ENST00000557762.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000412273 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000557762.1 RIN3-008

Summary