Transcript: ENST00000216487.7 RIN3-001

Description

Ras and Rab interactor 3 [Source:HGNC Symbol;Acc:18751]

Gene Synonyms

FLJ22439

Location

Chromosome 14: 92,980,118-93,155,339 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 19 domains and features, is associated with 76028 variant alleles and maps to 587 oligo probes.

Gene

This transcript is a product of gene ENSG00000100599.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000556418.1	RIN3-007	4079	420aa	ENSP00000450986.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000216487.7	RIN3-001	3859	985aa	ENSP00000216487.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32144	Q5CZ74 Q8TB24	NM_024832.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557762.1	RIN3-008	517	78aa	ENSP00000452155.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V534	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555589.1	RIN3-003	2814	159aa	ENSP00000450682.1	Nonsense mediated decay		G3V2I7	-	-
ENST00000418924.2	RIN3-005	3592	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000554888.1	RIN3-011	865	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000553959.1	RIN3-014	687	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000553992.1	RIN3-012	577	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000555908.1	RIN3-013	390	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000556385.1	RIN3-009	856	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000555891.1	RIN3-010	317	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 3,859 bps, Translation length: 985 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8TB24

CCDS

This transcript is a member of the Human CCDS set: CCDS32144

Version

ENST00000216487.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000412269 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000216487.7 RIN3-001

Summary