Transcript: ENST00000556480.1 AP4S1-009

Description

adaptor-related protein complex 4, sigma 1 subunit [Source:HGNC Symbol;Acc:575]

Gene Synonyms

AP47B, CLA20, CLAPS4, CPSQ6, SPG52

Location

Chromosome 14: 31,535,502-31,542,391 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 5 domains and features, is associated with 2836 variant alleles and maps to 118 oligo probes.

Gene

This transcript is a product of gene ENSG00000100478.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000216366.4	AP4S1-001	2256	159aa	ENSP00000216366.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9642	G3V4P7 Q9Y587	NM_007077.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554345.1	AP4S1-005	1491	135aa	ENSP00000450768.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58310	G3V4P7 Q9Y587	NM_001254726.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542754.2	AP4S1-002	1405	144aa	ENSP00000438170.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45093	G3V3X7 G3V4P7 Q9Y587	NM_001254728.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000334725.4	AP4S1-003	1122	149aa	ENSP00000334484.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58309	G3V4P7 Q9Y587	NM_001254727.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554609.1	AP4S1-004	1012	102aa	ENSP00000452383.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V4P7 G3V5J6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000313566.6	AP4S1-201	817	144aa	ENSP00000322508.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V4P7 J3KNK4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555417.1	AP4S1-008	769	7aa	ENSP00000451609.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000557346.1	AP4S1-006	663	133aa	ENSP00000451479.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V3X7 G3V4P7	NM_001254729.1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000556232.1	AP4S1-007	542	98aa	ENSP00000451918.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V4P7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000556480.1	AP4S1-009	407	83aa	ENSP00000451614.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YJI3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 407 bps, Translation length: 83 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000556480.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000409729 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000556480.1 AP4S1-009

Summary