Transcript: ENST00000427770.1 SOX10-003

Description

SRY (sex determining region Y)-box 10 [Source:HGNC Symbol;Acc:11190]

Gene Synonyms

DOM, PCWH, WS2E, WS4, WS4C

Location

About this transcript

This transcript has 3 exons, is annotated with 9 domains and features, is associated with 2955 variant alleles and maps to 164 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000396884.2	SOX10-002	2879	466aa	ENSP00000380093.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13964	A6PVD3 P56693	NM_006941.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360880.2	SOX10-001	2861	466aa	ENSP00000354130.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13964	A6PVD3 P56693	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000446929.1	SOX10-004	1095	179aa	ENSP00000399777.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000427770.1	SOX10-003	873	213aa	ENSP00000414853.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6PVD3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000470555.1	SOX10-005	124	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 873 bps, Translation length: 213 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000427770.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000313876 (version 1)