Transcript: ENST00000454173.1 LGALS1-005

Description

lectin, galactoside-binding, soluble, 1 [Source:HGNC Symbol;Acc:6561]

Gene Synonyms

GAL1, GBP

Location

About this transcript

This transcript has 5 exons, is associated with 2148 variant alleles and maps to 254 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000215909.5	LGALS1-001	560	135aa	ENSP00000215909.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13954	P09382	NM_002305.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000425542.1	LGALS1-004	637	69aa	ENSP00000404414.1	Nonsense mediated decay		F8WCQ5	-	-
ENST00000454173.1	LGALS1-005	331	38aa	ENSP00000388296.1	Nonsense mediated decay		F8WEI7	-	-
ENST00000489315.1	LGALS1-003	516	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480207.1	LGALS1-002	185	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472321.1	LGALS1-006	546	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000464120.1	LGALS1-007	303	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 331 bps, Translation length: 38 residues

Version

ENST00000454173.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000319486 (version 1)