Transcript: ENST00000215909.5 LGALS1-001

Description

lectin, galactoside-binding, soluble, 1 [Source:HGNC Symbol;Acc:6561]

Gene Synonyms

GAL1, GBP

Location

About this transcript

This transcript has 4 exons, is annotated with 8 domains and features, is associated with 2333 variant alleles and maps to 324 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000215909.5	LGALS1-001	560	135aa	ENSP00000215909.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13954	P09382	NM_002305.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000425542.1	LGALS1-004	637	69aa	ENSP00000404414.1	Nonsense mediated decay		F8WCQ5	-	-
ENST00000454173.1	LGALS1-005	331	38aa	ENSP00000388296.1	Nonsense mediated decay		F8WEI7	-	-
ENST00000489315.1	LGALS1-003	516	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480207.1	LGALS1-002	185	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472321.1	LGALS1-006	546	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000464120.1	LGALS1-007	303	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 560 bps, Translation length: 135 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P09382

CCDS

This transcript is a member of the Human CCDS set: CCDS13954

Version

ENST00000215909.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000319482 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.