Transcript: ENST00000521006.1 SEMA4G-003

Description

sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G [Source:HGNC Symbol;Acc:10735]

Gene Synonyms

FLJ20590, KIAA1619

Location

Chromosome 10: 102,729,280-102,745,373 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 25 domains and features, is associated with 7573 variant alleles and maps to 680 oligo probes.

Gene

This transcript is a product of gene ENSG00000095539.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000210633.3	SEMA4G-001	4094	843aa	ENSP00000210633.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7501	E5RFG2 E5RGX4 Q9NTN9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370250.4	SEMA4G-002	3596	838aa	ENSP00000359270.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFG2 E5RGX4 Q9NTN9	NM_017893.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000517724.1	SEMA4G-008	2675	702aa	ENSP00000430175.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55724	E5RFG2 E5RGX4 Q9NTN9 Q9NWU8	NM_001203244.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000519649.1	SEMA4G-007	2024	522aa	ENSP00000428896.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFG2 E5RGX4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000518124.1	SEMA4G-009	596	170aa	ENSP00000430103.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGX4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000476171.1	SEMA4G-004	393	131aa	ENSP00000429888.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000521006.1	SEMA4G-003	4656	838aa	ENSP00000430881.1	Nonsense mediated decay		E5RFG2 E5RGX4 Q9NTN9	-	-
ENST00000519756.1	SEMA4G-013	728	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484128.2	SEMA4G-012	714	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000518244.1	SEMA4G-010	652	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000518948.1	SEMA4G-011	376	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 14, Transcript length: 4,656 bps, Translation length: 838 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NTN9

Version

ENST00000521006.1

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000374986 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000521006.1 SEMA4G-003

Summary