Transcript: ENST00000518244.1 SEMA4G-010

Description

sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G [Source:HGNC Symbol;Acc:10735]

Gene Synonyms

FLJ20590, KIAA1619

Location

Chromosome 10: 102,729,287-102,732,642 forward strand.

About this transcript

This transcript has 3 exons, is associated with 1446 variant alleles and maps to 158 oligo probes.

Gene

This transcript is a product of gene ENSG00000095539.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000210633.3	SEMA4G-001	4094	843aa	ENSP00000210633.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7501	E5RFG2 E5RGX4 Q9NTN9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000370250.4	SEMA4G-002	3596	838aa	ENSP00000359270.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFG2 E5RGX4 Q9NTN9	NM_017893.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000517724.1	SEMA4G-008	2675	702aa	ENSP00000430175.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55724	E5RFG2 E5RGX4 Q9NTN9 Q9NWU8	NM_001203244.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000519649.1	SEMA4G-007	2024	522aa	ENSP00000428896.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFG2 E5RGX4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000518124.1	SEMA4G-009	596	170aa	ENSP00000430103.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGX4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000476171.1	SEMA4G-004	393	131aa	ENSP00000429888.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000521006.1	SEMA4G-003	4656	838aa	ENSP00000430881.1	Nonsense mediated decay		E5RFG2 E5RGX4 Q9NTN9	-	-
ENST00000519756.1	SEMA4G-013	728	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484128.2	SEMA4G-012	714	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000518244.1	SEMA4G-010	652	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000518948.1	SEMA4G-011	376	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 652 bps,

Version

ENST00000518244.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000374988 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000518244.1 SEMA4G-010

Summary