Transcript: ENST00000543555.1 MSH2-201

Description

mutS homolog 2 [Source:HGNC Symbol;Acc:7325]

Gene Synonyms

COCA1, FCC1, HNPCC, HNPCC1, LCFS2

Location

About this transcript

This transcript has 17 exons, is annotated with 21 domains and features, is associated with 60285 variant alleles and maps to 773 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000406134.1	MSH2-002	3628	921aa	ENSP00000384199.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J809 E9PHA6 Q53RU4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000233146.2	MSH2-001	3307	934aa	ENSP00000233146.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1834	B4DL39 C9J809 P43246 Q53RU4	NM_000251.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543555.1	MSH2-201	3018	868aa	ENSP00000442697.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58709	B4DL39 C9J809 P43246	NM_001258281.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000454849.1	MSH2-003	560	140aa	ENSP00000411482.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J809	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000461394.1	MSH2-005	416	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467323.1	MSH2-006	313	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 17, Coding exons: 16, Transcript length: 3,018 bps, Translation length: 868 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P43246

CCDS

This transcript is a member of the Human CCDS set: CCDS58709

Version

ENST00000543555.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.