Transcript: ENST00000596390.1 MCOLN1-003

Description

mucolipin 1 [Source:HGNC Symbol;Acc:13356]

Gene Synonyms

MG-2, ML4, MLIV, MST080, MSTP080, TRP-ML1, TRPM-L1, TRPML1

Location

Chromosome 19: 7,587,521-7,590,877 forward strand.

About this transcript

This transcript has 2 exons, is associated with 1520 variant alleles and maps to 104 oligo probes.

Gene

This transcript is a product of gene ENSG00000090674.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264079.6	MCOLN1-001	2082	580aa	ENSP00000264079.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12180	B4DFZ1 Q9GZU1	NM_020533.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000601003.1	MCOLN1-006	666	200aa	ENSP00000469074.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QXD0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000599334.1	MCOLN1-009	666	182aa	ENSP00000472176.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000394321.5	MCOLN1-002	2253	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000596390.1	MCOLN1-003	1178	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000596008.1	MCOLN1-005	772	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000595860.1	MCOLN1-007	758	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000598406.1	MCOLN1-004	644	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000602227.1	MCOLN1-010	492	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000594692.1	MCOLN1-008	470	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,178 bps,

Version

ENST00000596390.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000458975 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000596390.1 MCOLN1-003

Summary