Transcript: ENST00000394321.5 MCOLN1-002

Description

mucolipin 1 [Source:HGNC Symbol;Acc:13356]

Gene Synonyms

MG-2, ML4, MLIV, MST080, MSTP080, TRP-ML1, TRPM-L1, TRPML1

Location

Chromosome 19: 7,587,557-7,598,876 forward strand.

About this transcript

This transcript has 13 exons, is associated with 5804 variant alleles and maps to 546 oligo probes.

Gene

This transcript is a product of gene ENSG00000090674.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264079.6	MCOLN1-001	2082	580aa	ENSP00000264079.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12180	B4DFZ1 Q9GZU1	NM_020533.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000601003.1	MCOLN1-006	666	200aa	ENSP00000469074.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QXD0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000599334.1	MCOLN1-009	666	182aa	ENSP00000472176.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000394321.5	MCOLN1-002	2253	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000596390.1	MCOLN1-003	1178	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000596008.1	MCOLN1-005	772	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000595860.1	MCOLN1-007	758	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000598406.1	MCOLN1-004	644	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000602227.1	MCOLN1-010	492	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000594692.1	MCOLN1-008	470	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 0, Transcript length: 2,253 bps,

Version

ENST00000394321.5

Type

Retained intron

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000458976 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000394321.5 MCOLN1-002

Summary