Transcript: ENST00000534780.1 PGR-005

Description

progesterone receptor [Source:HGNC Symbol;Acc:8910]

Gene Synonyms

NR3C3, PR

Location

Chromosome 11: 100,909,847-100,999,801 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 39 domains and features, is associated with 40047 variant alleles and maps to 373 oligo probes.

Gene

This transcript is a product of gene ENSG00000082175.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000325455.5	PGR-001	13748	933aa	ENSP00000325120.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8310	P06401 Q6TZ07	NM_001271162.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000263463.5	PGR-006	2496	831aa	ENSP00000263463.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6TZ07 Q8TDS3	NM_001271161.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534013.1	PGR-002	1901	339aa	ENSP00000436561.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59229	P06401	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534780.1	PGR-005	2750	803aa	ENSP00000432352.1	Nonsense mediated decay		Q6TZ07 Q8NG42	-	-
ENST00000528960.1	PGR-004	2633	764aa	ENSP00000432914.1	Nonsense mediated decay		Q6TZ07 Q8NG44	-	-
ENST00000526300.1	PGR-007	2365	695aa	ENSP00000436803.1	Nonsense mediated decay		Q6TZ07 Q8NG45	-	-
ENST00000533207.1	PGR-008	2224	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530764.1	PGR-009	620	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 6, Transcript length: 2,750 bps, Translation length: 803 residues

Version

ENST00000534780.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000394939 (version 1)

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Transcript: ENST00000534780.1 PGR-005

Summary