Transcript: ENST00000325455.5 PGR-001

Description

progesterone receptor [Source:HGNC Symbol;Acc:8910]

Gene Synonyms

NR3C3, PR

Location

Chromosome 11: 100,900,355-101,001,255 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 39 domains and features, is associated with 44577 variant alleles and maps to 729 oligo probes.

Gene

This transcript is a product of gene ENSG00000082175.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000325455.5	PGR-001	13748	933aa	ENSP00000325120.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8310	P06401 Q6TZ07	NM_001271162.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000263463.5	PGR-006	2496	831aa	ENSP00000263463.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6TZ07 Q8TDS3	NM_001271161.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534013.1	PGR-002	1901	339aa	ENSP00000436561.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59229	P06401	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534780.1	PGR-005	2750	803aa	ENSP00000432352.1	Nonsense mediated decay		Q6TZ07 Q8NG42	-	-
ENST00000528960.1	PGR-004	2633	764aa	ENSP00000432914.1	Nonsense mediated decay		Q6TZ07 Q8NG44	-	-
ENST00000526300.1	PGR-007	2365	695aa	ENSP00000436803.1	Nonsense mediated decay		Q6TZ07 Q8NG45	-	-
ENST00000533207.1	PGR-008	2224	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530764.1	PGR-009	620	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 13,748 bps, Translation length: 933 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P06401

CCDS

This transcript is a member of the Human CCDS set: CCDS8310

Version

ENST00000325455.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000394934 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000325455.5 PGR-001

Summary