Transcript: ENST00000572426.1 ZZEF1-003

Description

zinc finger, ZZ-type with EF-hand domain 1 [Source:HGNC Symbol;Acc:29027]

Gene Synonyms

FLJ10821, KIAA0399, ZZZ4

Location

Chromosome 17: 3,936,825-3,974,210 reverse strand.

About this transcript

This transcript has 15 exons, is associated with 17167 variant alleles and maps to 305 oligo probes.

Gene

This transcript is a product of gene ENSG00000074755.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000381638.2	ZZEF1-001	11456	2961aa	ENSP00000371051.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11043	O43149	NM_015113.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000573183.1	ZZEF1-005	2667	812aa	ENSP00000458554.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000571436.1	ZZEF1-004	2831	219aa	ENSP00000459023.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000572699.1	ZZEF1-007	689	148aa	ENSP00000460633.1	Nonsense mediated decay		I3L3Q3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000572831.1	ZZEF1-011	558	66aa	ENSP00000459796.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000574474.1	ZZEF1-002	4047	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000572426.1	ZZEF1-003	3226	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000573536.1	ZZEF1-006	3190	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000573606.2	ZZEF1-009	865	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000575428.1	ZZEF1-010	563	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000570365.1	ZZEF1-008	539	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 15, Coding exons: 0, Transcript length: 3,226 bps,

Version

ENST00000572426.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000438431 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000572426.1 ZZEF1-003

Summary