Transcript: ENST00000381638.2 ZZEF1-001

Description

zinc finger, ZZ-type with EF-hand domain 1 [Source:HGNC Symbol;Acc:29027]

Gene Synonyms

FLJ10821, KIAA0399, ZZZ4

Location

Chromosome 17: 3,907,739-4,046,314 reverse strand.

About this transcript

This transcript has 55 exons, is annotated with 31 domains and features, is associated with 65719 variant alleles and maps to 1469 oligo probes.

Gene

This transcript is a product of gene ENSG00000074755.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000381638.2	ZZEF1-001	11456	2961aa	ENSP00000371051.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11043	O43149	NM_015113.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000573183.1	ZZEF1-005	2667	812aa	ENSP00000458554.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000571436.1	ZZEF1-004	2831	219aa	ENSP00000459023.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000572699.1	ZZEF1-007	689	148aa	ENSP00000460633.1	Nonsense mediated decay		I3L3Q3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000572831.1	ZZEF1-011	558	66aa	ENSP00000459796.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000574474.1	ZZEF1-002	4047	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000572426.1	ZZEF1-003	3226	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000573536.1	ZZEF1-006	3190	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000573606.2	ZZEF1-009	865	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000575428.1	ZZEF1-010	563	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000570365.1	ZZEF1-008	539	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 55, Coding exons: 55, Transcript length: 11,456 bps, Translation length: 2,961 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43149

CCDS

This transcript is a member of the Human CCDS set: CCDS11043

Version

ENST00000381638.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000207480 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000381638.2 ZZEF1-001

Summary