Transcript: ENST00000308924.4 U2AF2-002

Description

U2 small nuclear RNA auxiliary factor 2 [Source:HGNC Symbol;Acc:23156]

Gene Synonyms

U2AF65

Location

Chromosome 19: 56,166,431-56,185,664 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 22 domains and features, is associated with 11932 variant alleles and maps to 425 oligo probes.

Gene

This transcript is a product of gene ENSG00000063244.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000450554.2	U2AF2-001	3022	471aa	ENSP00000388475.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46197	K7ENG2 P26368	NM_007279.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000308924.4	U2AF2-002	1698	475aa	ENSP00000307863.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12933	P26368	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000590551.1	U2AF2-008	1104	307aa	ENSP00000466935.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ENG2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000592874.1	U2AF2-007	849	86aa	ENSP00000466167.2	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000587196.2	U2AF2-003	778	51aa	ENSP00000470020.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000588850.1	U2AF2-010	637	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000587275.1	U2AF2-009	554	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000592867.1	U2AF2-005	447	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,698 bps, Translation length: 475 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P26368

CCDS

This transcript is a member of the Human CCDS set: CCDS12933

Version

ENST00000308924.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000453599 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000308924.4 U2AF2-002

Summary