Transcript: ENST00000587196.2 U2AF2-003

Description

U2 small nuclear RNA auxiliary factor 2 [Source:HGNC Symbol;Acc:23156]

Gene Synonyms

U2AF65

Location

Chromosome 19: 56,166,475-56,173,312 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 1 domain and feature, is associated with 4500 variant alleles and maps to 136 oligo probes.

Gene

This transcript is a product of gene ENSG00000063244.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000450554.2	U2AF2-001	3022	471aa	ENSP00000388475.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46197	K7ENG2 P26368	NM_007279.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000308924.4	U2AF2-002	1698	475aa	ENSP00000307863.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12933	P26368	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000590551.1	U2AF2-008	1104	307aa	ENSP00000466935.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ENG2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000592874.1	U2AF2-007	849	86aa	ENSP00000466167.2	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000587196.2	U2AF2-003	778	51aa	ENSP00000470020.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000588850.1	U2AF2-010	637	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000587275.1	U2AF2-009	554	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000592867.1	U2AF2-005	447	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 2, Transcript length: 778 bps, Translation length: 51 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000587196.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000453600 (version 3)

Favourite species

All species

Recent locations

Transcript: ENST00000587196.2 U2AF2-003

Summary