Transcript: ENST00000523369.1 LCP2-012

Description

lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa) [Source:HGNC Symbol;Acc:6529]

Gene Synonyms

SLP-76, SLP76

Location

Chromosome 5: 169,683,530-169,685,502 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 827 variant alleles and maps to 53 oligo probes.

Gene

This transcript is a product of gene ENSG00000043462.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000046794.5	LCP2-001	4678	533aa	ENSP00000046794.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47339	Q13094	NM_005565.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000521416.1	LCP2-005	1599	328aa	ENSP00000428871.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ESF6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520344.1	LCP2-011	666	140aa	ENSP00000430391.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RKA2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000520322.1	LCP2-006	2211	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000522760.1	LCP2-009	962	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000519594.1	LCP2-010	858	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000522823.1	LCP2-007	628	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000519149.1	LCP2-008	614	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000523369.1	LCP2-012	512	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 512 bps,

Version

ENST00000523369.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000371738 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000523369.1 LCP2-012

Summary