Transcript: ENST00000521416.1 LCP2-005

Description

lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa) [Source:HGNC Symbol;Acc:6529]

Gene Synonyms

SLP-76, SLP76

Location

Chromosome 5: 169,675,304-169,694,300 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 11 domains and features, is associated with 8189 variant alleles and maps to 420 oligo probes.

Gene

This transcript is a product of gene ENSG00000043462.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000046794.5	LCP2-001	4678	533aa	ENSP00000046794.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47339	Q13094	NM_005565.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000521416.1	LCP2-005	1599	328aa	ENSP00000428871.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ESF6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520344.1	LCP2-011	666	140aa	ENSP00000430391.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RKA2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000520322.1	LCP2-006	2211	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000522760.1	LCP2-009	962	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000519594.1	LCP2-010	858	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000522823.1	LCP2-007	628	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000519149.1	LCP2-008	614	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000523369.1	LCP2-012	512	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 1,599 bps, Translation length: 328 residues

Version

ENST00000521416.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000371731 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000521416.1 LCP2-005

Summary