Transcript: ENST00000508775.1 RNASET2-001

Description

ribonuclease T2 [Source:HGNC Symbol;Acc:21686]

Gene Synonyms

FLJ10907, RNASE6PL, bA514O12.3

Location

Chromosome 6: 167,342,992-167,370,190 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 8 domains and features, is associated with 14245 variant alleles and maps to 391 oligo probes.

Gene

This transcript is a product of gene ENSG00000026297.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000366855.6	RNASET2-007	1417	218aa	ENSP00000424947.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6REQ6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000508775.1	RNASET2-001	1375	256aa	ENSP00000426455.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5295	D6REQ6 D6RHI9 O00584	NM_003730.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000478180.2	RNASET2-004	963	253aa	ENSP00000426059.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RHI9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000476238.2	RNASET2-006	887	256aa	ENSP00000422846.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5295	D6REQ6 D6RHI9 O00584	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000421787.1	RNASET2-002	1924	121aa	ENSP00000390833.1	Nonsense mediated decay		O00584	-	-
ENST00000028008.5	RNASET2-012	1220	71aa	ENSP00000028008.5	Nonsense mediated decay		J3QQ64	-	-
ENST00000496851.2	RNASET2-005	881	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467705.2	RNASET2-008	524	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000509073.1	RNASET2-013	433	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000358165.3	RNASET2-003	2445	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000510083.1	RNASET2-011	2280	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000499370.2	RNASET2-010	2164	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,375 bps, Translation length: 256 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O00584

CCDS

This transcript is a member of the Human CCDS set: CCDS5295

Version

ENST00000508775.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000043089 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000508775.1 RNASET2-001

Summary