Transcript: ENST00000476238.2 RNASET2-006

Description

ribonuclease T2 [Source:HGNC Symbol;Acc:21686]

Gene Synonyms

FLJ10907, RNASE6PL, bA514O12.3

Location

Chromosome 6: 167,343,028-167,370,672 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 8 domains and features, is associated with 14558 variant alleles and maps to 330 oligo probes.

Gene

This transcript is a product of gene ENSG00000026297.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000366855.6	RNASET2-007	1417	218aa	ENSP00000424947.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6REQ6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000508775.1	RNASET2-001	1375	256aa	ENSP00000426455.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5295	D6REQ6 D6RHI9 O00584	NM_003730.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000478180.2	RNASET2-004	963	253aa	ENSP00000426059.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RHI9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000476238.2	RNASET2-006	887	256aa	ENSP00000422846.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5295	D6REQ6 D6RHI9 O00584	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000421787.1	RNASET2-002	1924	121aa	ENSP00000390833.1	Nonsense mediated decay		O00584	-	-
ENST00000028008.5	RNASET2-012	1220	71aa	ENSP00000028008.5	Nonsense mediated decay		J3QQ64	-	-
ENST00000496851.2	RNASET2-005	881	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467705.2	RNASET2-008	524	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000509073.1	RNASET2-013	433	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000358165.3	RNASET2-003	2445	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000510083.1	RNASET2-011	2280	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000499370.2	RNASET2-010	2164	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 887 bps, Translation length: 256 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O00584

CCDS

This transcript is a member of the Human CCDS set: CCDS5295

Version

ENST00000476238.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000043094 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000476238.2 RNASET2-006

Summary