Transcript: ENST00000581514.1 SCN4A-002

Description

sodium channel, voltage-gated, type IV, alpha subunit [Source:HGNC Symbol;Acc:10591]

Gene Synonyms

HOKPP2, HYKPP, HYPP, NAC1A, Na(V)1.4, Nav1.4, SkM1

Location

About this transcript

This transcript has 2 exons, is associated with 804 variant alleles and maps to 48 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000578147.1	SCN4A-001	7805	1836aa	ENSP00000463963.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QQZ1 Q9H3L9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000435607.1	SCN4A-201	7805	1836aa	ENSP00000396320.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45761	P35499 Q9H3L9	NM_000334.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000584310.1	SCN4A-003	577	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000581514.1	SCN4A-002	567	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 567 bps,

Version

ENST00000581514.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000444564 (version 1)