Transcript: ENST00000578147.1 SCN4A-001

Description

sodium channel, voltage-gated, type IV, alpha subunit [Source:HGNC Symbol;Acc:10591]

Gene Synonyms

HOKPP2, HYKPP, HYPP, NAC1A, Na(V)1.4, Nav1.4, SkM1

Location

About this transcript

This transcript has 24 exons, is annotated with 61 domains and features, is associated with 18135 variant alleles and maps to 708 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000578147.1	SCN4A-001	7805	1836aa	ENSP00000463963.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QQZ1 Q9H3L9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000435607.1	SCN4A-201	7805	1836aa	ENSP00000396320.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45761	P35499 Q9H3L9	NM_000334.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000584310.1	SCN4A-003	577	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000581514.1	SCN4A-002	567	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 24, Coding exons: 24, Transcript length: 7,805 bps, Translation length: 1,836 residues

Version

ENST00000578147.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000444562 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.