Transcript: ENST00000486086.1 GTF2IRD1-007

Description

GTF2I repeat domain containing 1 [Source:HGNC Symbol;Acc:4661]

Gene Synonyms

BEN, CREAM1, Cream1, GTF3, MUSTRD1, MusTRD1, RBAP2, WBS, WBSCR11, WBSCR12, hMusTRD1alpha1

Location

Chromosome 7: 74,015,287-74,016,910 forward strand.

About this transcript

This transcript has 2 exons, is associated with 733 variant alleles and maps to 133 oligo probes.

Gene

This transcript is a product of gene ENSG00000006704.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000476977.1	GTF2IRD1-003	5868	960aa	ENSP00000418383.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PFE2 Q59FS0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000265755.3	GTF2IRD1-001	3430	959aa	ENSP00000265755.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5571	Q75MX6 Q9UHL9	NM_016328.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455841.2	GTF2IRD1-002	3315	976aa	ENSP00000397566.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56492	Q9UHL9	NM_001199207.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000424337.2	GTF2IRD1-005	3077	944aa	ENSP00000408477.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47613	Q9UHL9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000470715.1	GTF2IRD1-006	824	275aa	ENSP00000417909.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000489094.1	GTF2IRD1-004	2274	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486086.1	GTF2IRD1-007	440	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 440 bps,

Version

ENST00000486086.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000351535 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000486086.1 GTF2IRD1-007

Summary