Transcript: ENST00000455841.2 GTF2IRD1-002

Description

GTF2I repeat domain containing 1 [Source:HGNC Symbol;Acc:4661]

Gene Synonyms

BEN, CREAM1, Cream1, GTF3, MUSTRD1, MusTRD1, RBAP2, WBS, WBSCR11, WBSCR12, hMusTRD1alpha1

Location

Chromosome 7: 73,868,300-74,016,931 forward strand.

About this transcript

This transcript has 27 exons, is annotated with 24 domains and features, is associated with 66183 variant alleles and maps to 726 oligo probes.

Gene

This transcript is a product of gene ENSG00000006704.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000476977.1	GTF2IRD1-003	5868	960aa	ENSP00000418383.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PFE2 Q59FS0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000265755.3	GTF2IRD1-001	3430	959aa	ENSP00000265755.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5571	Q75MX6 Q9UHL9	NM_016328.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455841.2	GTF2IRD1-002	3315	976aa	ENSP00000397566.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56492	Q9UHL9	NM_001199207.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000424337.2	GTF2IRD1-005	3077	944aa	ENSP00000408477.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47613	Q9UHL9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000470715.1	GTF2IRD1-006	824	275aa	ENSP00000417909.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000489094.1	GTF2IRD1-004	2274	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486086.1	GTF2IRD1-007	440	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 27, Coding exons: 26, Transcript length: 3,315 bps, Translation length: 976 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UHL9

CCDS

This transcript is a member of the Human CCDS set: CCDS56492

Version

ENST00000455841.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000351530 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000455841.2 GTF2IRD1-002

Summary