Transcript: ENST00000538785.1 LAMP2-201

Description

lysosomal-associated membrane protein 2 [Source:HGNC Symbol;Acc:6501]

Gene Synonyms

CD107b, LAMP-2, LAMPB, LGP110

Location

Chromosome X: 119,561,969-119,603,184 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 12 domains and features, is associated with 12076 variant alleles and maps to 223 oligo probes.

Gene

This transcript is a product of gene ENSG00000005893.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000371335.4	LAMP2-002	4030	410aa	ENSP00000360386.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14600	B4E2S7 P13473	NM_013995.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434600.2	LAMP2-004	2089	411aa	ENSP00000408411.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48159	P13473	NM_002294.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000200639.4	LAMP2-001	1867	410aa	ENSP00000200639.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14599	P13473	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540603.1	LAMP2-202	1625	363aa	ENSP00000440479.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E2S7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538785.1	LAMP2-201	1433	300aa	ENSP00000440506.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z2R9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000486593.1	LAMP2-003	1069	258aa	ENSP00000431526.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,433 bps, Translation length: 300 residues

Version

ENST00000538785.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000538785.1 LAMP2-201

Summary