Transcript: ENST00000524377.1 NTRK1-007

Description

neurotrophic tyrosine kinase, receptor, type 1 [Source:HGNC Symbol;Acc:8031]

Gene Synonyms

MTC, TRK, TRK1, TRKA, Trk-A, p140-TrkA

Location

Chromosome 1: 156,830,686-156,851,434 forward strand.

About this transcript

This transcript has 17 exons, is annotated with 37 domains and features, is associated with 18327 variant alleles and maps to 466 oligo probes.

Gene

This transcript is a product of gene ENSG00000198400.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000524377.1	NTRK1-007	2432	796aa	ENSP00000431418.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1161	P04629	NM_002529.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000368196.3	NTRK1-001	2701	790aa	ENSP00000357179.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30891	P04629	NM_001012331.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000392302.2	NTRK1-004	2609	760aa	ENSP00000376120.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30890	P04629	NM_001007792.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000358660.3	NTRK1-006	2492	793aa	ENSP00000351486.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KP20	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000497019.2	NTRK1-002	2508	388aa	ENSP00000436804.1	Nonsense mediated decay		E9PQG0	-	-
ENST00000531606.1	NTRK1-011	642	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489021.2	NTRK1-008	570	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000530298.1	NTRK1-005	3052	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000534682.1	NTRK1-010	844	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000533630.1	NTRK1-009	645	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 2,432 bps, Translation length: 796 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P04629

CCDS

This transcript is a member of the Human CCDS set: CCDS1161

Version

ENST00000524377.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000392279 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000524377.1 NTRK1-007

Summary