Transcript: ENST00000530298.1 NTRK1-005

Description

neurotrophic tyrosine kinase, receptor, type 1 [Source:HGNC Symbol;Acc:8031]

Gene Synonyms

MTC, TRK, TRK1, TRKA, Trk-A, p140-TrkA

Location

Chromosome 1: 156,807,001-156,851,642 forward strand.

About this transcript

This transcript has 17 exons, is associated with 30665 variant alleles and maps to 462 oligo probes.

Gene

This transcript is a product of gene ENSG00000198400.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000368196.3	NTRK1-001	2701	790aa	ENSP00000357179.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30891	P04629	NM_001012331.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392302.2	NTRK1-004	2609	760aa	ENSP00000376120.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30890	P04629	NM_001007792.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000358660.3	NTRK1-006	2492	793aa	ENSP00000351486.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KP20	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524377.1	NTRK1-007	2432	796aa	ENSP00000431418.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1161	P04629	NM_002529.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000497019.2	NTRK1-002	2508	388aa	ENSP00000436804.1	Nonsense mediated decay		E9PQG0	-	-
ENST00000531606.1	NTRK1-011	642	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489021.2	NTRK1-008	570	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000530298.1	NTRK1-005	3052	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000534682.1	NTRK1-010	844	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000533630.1	NTRK1-009	645	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 17, Coding exons: 0, Transcript length: 3,052 bps,

Version

ENST00000530298.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000392278 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000530298.1 NTRK1-005

Summary