Transcript: ENST00000497019.2 NTRK1-002

Description

neurotrophic tyrosine kinase, receptor, type 1 [Source:HGNC Symbol;Acc:8031]

Gene Synonyms

MTC, TRK, TRK1, TRKA, Trk-A, p140-TrkA

Location

Chromosome 1: 156,785,471-156,851,641 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 10 domains and features, is associated with 39850 variant alleles and maps to 481 oligo probes.

Gene

This transcript is a product of gene ENSG00000198400.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000368196.3	NTRK1-001	2701	790aa	ENSP00000357179.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30891	P04629	NM_001012331.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392302.2	NTRK1-004	2609	760aa	ENSP00000376120.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30890	P04629	NM_001007792.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000358660.3	NTRK1-006	2492	793aa	ENSP00000351486.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KP20	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524377.1	NTRK1-007	2432	796aa	ENSP00000431418.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1161	P04629	NM_002529.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000497019.2	NTRK1-002	2508	388aa	ENSP00000436804.1	Nonsense mediated decay		E9PQG0	-	-
ENST00000531606.1	NTRK1-011	642	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489021.2	NTRK1-008	570	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000530298.1	NTRK1-005	3052	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000534682.1	NTRK1-010	844	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000533630.1	NTRK1-009	645	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 11, Transcript length: 2,508 bps, Translation length: 388 residues

Version

ENST00000497019.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000098980 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000497019.2 NTRK1-002

Summary