Transcript: ENST00000465572.2 LTC4S-002

Description

leukotriene C4 synthase [Source:HGNC Symbol;Acc:6719]

Gene Synonyms

MGC33147

Location

Chromosome 5: 179,220,981-179,223,648 forward strand.

About this transcript

This transcript has 4 exons, is associated with 1563 variant alleles and maps to 412 oligo probes.

Gene

This transcript is a product of gene ENSG00000213316.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000292596.10	LTC4S-001	666	150aa	ENSP00000292596.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34316	B2R523 Q16873	NM_145867.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000401985.3	LTC4S-003	486	93aa	ENSP00000385627.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MCC3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000505170.1	LTC4S-008	582	69aa	ENSP00000427299.1	Nonsense mediated decay		D6RJA1	-	-
ENST00000465572.2	LTC4S-002	909	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466071.1	LTC4S-005	564	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000509898.1	LTC4S-006	507	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000486713.1	LTC4S-004	496	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000510544.1	LTC4S-007	450	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 909 bps,

Version

ENST00000465572.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000317537 (version 3)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000465572.2 LTC4S-002

Summary