Transcript: ENST00000443551.2 C2orf88-005

Description

chromosome 2 open reading frame 88 [Source:HGNC Symbol;Acc:28191]

Gene Synonyms

MGC13057, smAKAP

Location

Chromosome 2: 191,045,681-191,064,940 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 1 domain and feature, is associated with 8724 variant alleles and maps to 247 oligo probes.

Gene

This transcript is a product of gene ENSG00000187699.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000340623.4	C2orf88-004	4035	95aa	ENSP00000345107.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42792	C9JS57 H7BZ15 Q9BSF0	NM_032321.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409870.1	C2orf88-008	1441	95aa	ENSP00000386649.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42792	C9JS57 H7BZ15 Q9BSF0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396974.2	C2orf88-003	998	95aa	ENSP00000380172.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42792	C9JS57 H7BZ15 Q9BSF0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000443551.2	C2orf88-005	692	95aa	ENSP00000405225.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42792	C9JS57 H7BZ15 Q9BSF0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409545.2	C2orf88-009	570	67aa	ENSP00000386976.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JS57 H7BZ15	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000450357.1	C2orf88-007	486	30aa	ENSP00000394370.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JS57	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000478197.1	C2orf88-002	567	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490033.1	C2orf88-006	482	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495546.1	C2orf88-001	387	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 692 bps, Translation length: 95 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BSF0

CCDS

This transcript is a member of the Human CCDS set: CCDS42792

Version

ENST00000443551.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000334955 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000443551.2 C2orf88-005

Summary