Transcript: ENST00000340623.4 C2orf88-004

Description

chromosome 2 open reading frame 88 [Source:HGNC Symbol;Acc:28191]

Gene Synonyms

MGC13057, smAKAP

Location

Chromosome 2: 191,045,589-191,068,210 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 1 domain and feature, is associated with 10233 variant alleles and maps to 409 oligo probes.

Gene

This transcript is a product of gene ENSG00000187699.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000340623.4	C2orf88-004	4035	95aa	ENSP00000345107.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42792	C9JS57 H7BZ15 Q9BSF0	NM_032321.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409870.1	C2orf88-008	1441	95aa	ENSP00000386649.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42792	C9JS57 H7BZ15 Q9BSF0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396974.2	C2orf88-003	998	95aa	ENSP00000380172.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42792	C9JS57 H7BZ15 Q9BSF0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000443551.2	C2orf88-005	692	95aa	ENSP00000405225.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42792	C9JS57 H7BZ15 Q9BSF0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409545.2	C2orf88-009	570	67aa	ENSP00000386976.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JS57 H7BZ15	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000450357.1	C2orf88-007	486	30aa	ENSP00000394370.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JS57	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000478197.1	C2orf88-002	567	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490033.1	C2orf88-006	482	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495546.1	C2orf88-001	387	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 4,035 bps, Translation length: 95 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BSF0

CCDS

This transcript is a member of the Human CCDS set: CCDS42792

Version

ENST00000340623.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000334954 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000340623.4 C2orf88-004

Summary