Transcript: ENST00000409870.1 C2orf88-008

Description

chromosome 2 open reading frame 88 [Source:HGNC Symbol;Acc:28191]

Gene Synonyms

MGC13057, smAKAP

Location

Chromosome 2: 191,045,208-191,064,935 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 1 domain and feature, is associated with 8996 variant alleles and maps to 296 oligo probes.

Gene

This transcript is a product of gene ENSG00000187699.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000340623.4	C2orf88-004	4035	95aa	ENSP00000345107.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42792	C9JS57 H7BZ15 Q9BSF0	NM_032321.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409870.1	C2orf88-008	1441	95aa	ENSP00000386649.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42792	C9JS57 H7BZ15 Q9BSF0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396974.2	C2orf88-003	998	95aa	ENSP00000380172.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42792	C9JS57 H7BZ15 Q9BSF0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000443551.2	C2orf88-005	692	95aa	ENSP00000405225.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42792	C9JS57 H7BZ15 Q9BSF0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409545.2	C2orf88-009	570	67aa	ENSP00000386976.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JS57 H7BZ15	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000450357.1	C2orf88-007	486	30aa	ENSP00000394370.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JS57	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000478197.1	C2orf88-002	567	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490033.1	C2orf88-006	482	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495546.1	C2orf88-001	387	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 1,441 bps, Translation length: 95 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BSF0

CCDS

This transcript is a member of the Human CCDS set: CCDS42792

Version

ENST00000409870.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000334958 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000409870.1 C2orf88-008

Summary