Transcript: ENST00000561354.1 LRRC16B-004

Description

leucine rich repeat containing 16B [Source:HGNC Symbol;Acc:20272]

Gene Synonyms

BC008134, C14orf121, CARMIL3, crml-1

Location

Chromosome 14: 24,529,950-24,531,139 forward strand.

About this transcript

This transcript has 3 exons, is associated with 474 variant alleles and maps to 110 oligo probes.

Gene

This transcript is a product of gene ENSG00000186648.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000342740.5	LRRC16B-001	4597	1372aa	ENSP00000340467.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32054	Q8ND23	NM_138360.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000334420.7	LRRC16B-201	4450	425aa	ENSP00000334701.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8ND23	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000559694.1	LRRC16B-003	4319	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000560349.1	LRRC16B-002	2664	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000561354.1	LRRC16B-004	564	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 564 bps,

Version

ENST00000561354.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000416529 (version 1)

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Transcript: ENST00000561354.1 LRRC16B-004

Summary