Transcript: ENST00000561354.1 LRRC16B-004

Description

leucine rich repeat containing 16B [Source:HGNC Symbol;Acc:20272]

Gene Synonyms

BC008134, C14orf121, CARMIL3, crml-1

Location

About this transcript

This transcript has 3 exons, is associated with 474 variant alleles and maps to 110 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000342740.5	LRRC16B-001	4597	1372aa	ENSP00000340467.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32054	Q8ND23	NM_138360.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000334420.7	LRRC16B-201	4450	425aa	ENSP00000334701.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8ND23	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000559694.1	LRRC16B-003	4319	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000560349.1	LRRC16B-002	2664	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000561354.1	LRRC16B-004	564	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 564 bps,

Version

ENST00000561354.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000416529 (version 1)