Transcript: ENST00000570641.1 SPNS2-008

Description

spinster homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:26992]

Location

Chromosome 17: 4,437,680-4,440,112 forward strand.

About this transcript

This transcript has 2 exons, is associated with 2325 variant alleles and maps to 92 oligo probes.

Gene

This transcript is a product of gene ENSG00000183018.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000329078.3	SPNS2-001	3447	549aa	ENSP00000333292.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42237	Q8IVW8	NM_001124758.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000571386.1	SPNS2-003	846	282aa	ENSP00000461410.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L4N9	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000570979.1	SPNS2-002	1768	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000576635.2	SPNS2-004	901	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000573106.1	SPNS2-006	828	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000570641.1	SPNS2-008	783	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000573990.1	SPNS2-007	761	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000571668.1	SPNS2-005	704	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 783 bps,

Version

ENST00000570641.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000439108 (version 1)

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Transcript: ENST00000570641.1 SPNS2-008

Summary